pscan scans proteins using PRINTS. The home web page of the PRINTS database is http://www.bioinf.man.ac.uk/dbbrowser/PRINTS/.

Here is a sample session with pscan:

% pscan
Scans proteins using PRINTS
Input sequence(s): sw:OPSD_HUMAN
Minimum number of elements per fingerprint [2]:
Maximum number of elements per fingerprint [20]:
Output file [opsd_human.pscan]:

Mandatory qualifiers:

[-sequence] (seqall)

Sequence database USA.

-emin (integer)

Minimum number of elements per fingerprint.

-emax (integer)

Maximum number of elements per fingerprint.

[-outfile] (outfile)

Output filename.