codcmp reads and compares two codon usage table files.

Here is a sample session with codcmp, comparing the codon usage tables for Escherichia coli and Haemophilus influenzae:

% codcmp
Codon usage file [Ehum.cut]: Eeco.cut
Codon usage file [Ehum.cut]: Ehin.cut
Output file [outfile.codcmp]:

Mandatory qualifiers:

[-first] (codon)

First codon usage file.

[-second] (codon)

Second codon usage file.

[-outfile] (outfile)

Output filename.